fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aliiroseovarius pelagivivens CECT 8811

Genome identifier: GCF_900302485.1

NCBI assembly name: A.pelagivivensCECT8811_Spades_Prokka

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Aliiroseovarius, Aliiroseovarius pelagivivens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Aliiroseovarius, Aliiroseovarius pelagivivens

Scaffolds: 4

Genes: 3,250 Protein-coding: 3,192 RNAs: 50 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_OMOI01000001.1 Aliiroseovarius pelagivivens strain CECT 8811, whole genome shotgun sequence 2,500,797
NZ_OMOI01000002.1 Aliiroseovarius pelagivivens strain CECT 8811, whole genome shotgun sequence 819,404
NZ_OMOI01000003.1 Aliiroseovarius pelagivivens strain CECT 8811, whole genome shotgun sequence 5,839
NZ_OMOI01000004.1 Aliiroseovarius pelagivivens strain CECT 8811, whole genome shotgun sequence 5,513

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory