fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pontivivens insulae CeCT 8812

Genome identifier: GCF_900302495.1

NCBI assembly name: P.insulaeCECT8812_Spades_Prokka

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pontivivens, Pontivivens insulae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Pontivivens, Pontivivens insulae

Scaffolds: 10

Genes: 3,507 Protein-coding: 3,439 RNAs: 49 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_OMKW01000001.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 1,118,895
NZ_OMKW01000002.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 996,947
NZ_OMKW01000003.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 723,721
NZ_OMKW01000004.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 576,073
NZ_OMKW01000005.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 83,756
NZ_OMKW01000006.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 32,298
NZ_OMKW01000007.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 6,137
NZ_OMKW01000008.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 5,513
NZ_OMKW01000009.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 2,387
NZ_OMKW01000010.1 Pontivivens insulae strain CeCT 8812, whole genome shotgun sequence 1,375

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory