fast.genomicscompare 6,575 genera of bacteria & archaea

 

Orientia tsutsugamushi Karp

Genome identifier: GCF_900327275.1

NCBI assembly name: Karp

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, Rickettsiaceae, Orientia, Orientia tsutsugamushi

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, Rickettsiaceae, Orientia, Orientia tsutsugamushi

Scaffolds: 1

Genes: 2,522 Protein-coding: 1,946 RNAs: 40 pseudogenes: 536

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LS398548.1 Orientia tsutsugamushi isolate Karp chromosome I 2,469,803

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory