fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sarcina ventriculi NCTC12966

Genome identifier: GCF_900456775.1

NCBI assembly name: 53750_C02

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Clostridiaceae, Sarcina, Sarcina ventriculi

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Sarcina, Sarcina ventriculi

Scaffolds: 14

Genes: 2,476 Protein-coding: 2,312 RNAs: 131 pseudogenes: 33

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_UAUL01000001.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 828,953
NZ_UAUL01000002.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 46,508
NZ_UAUL01000003.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 13,006
NZ_UAUL01000004.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 14,503
NZ_UAUL01000005.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 5,009
NZ_UAUL01000006.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 5,972
NZ_UAUL01000007.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 508,520
NZ_UAUL01000008.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 327,557
NZ_UAUL01000009.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 228,832
NZ_UAUL01000010.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 204,154
NZ_UAUL01000011.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 183,565
NZ_UAUL01000012.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 80,727
NZ_UAUL01000013.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 62,756
NZ_UAUL01000014.1 Sarcina ventriculi strain NCTC12966, whole genome shotgun sequence 39,576

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory