fast.genomicscompare 6,575 genera of bacteria & archaea

 

Agathobaculum sp900625105 Marseille-P7918

Genome identifier: GCF_900625105.1

NCBI assembly name: PRJEB29224

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Butyricicoccaceae, Agathobaculum, Agathobaculum sp900625105

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Agathobaculum

Scaffolds: 36

Genes: 2,852 Protein-coding: 2,734 RNAs: 70 pseudogenes: 48

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_UYYD01000001.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 754,434
NZ_UYYD01000002.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 571,202
NZ_UYYD01000003.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 250,929
NZ_UYYD01000004.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 177,381
NZ_UYYD01000005.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 171,868
NZ_UYYD01000006.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 121,748
NZ_UYYD01000007.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 111,117
NZ_UYYD01000008.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 93,309
NZ_UYYD01000009.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 92,972
NZ_UYYD01000010.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 87,381
NZ_UYYD01000011.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 79,419
NZ_UYYD01000012.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 67,166
NZ_UYYD01000013.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 52,147
NZ_UYYD01000014.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 31,988
NZ_UYYD01000015.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 25,799
NZ_UYYD01000016.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 25,469
NZ_UYYD01000017.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 22,352
NZ_UYYD01000018.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 21,746
NZ_UYYD01000019.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 19,917
NZ_UYYD01000020.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 12,763
NZ_UYYD01000021.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 5,572
NZ_UYYD01000022.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 5,201
NZ_UYYD01000023.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 4,051
NZ_UYYD01000024.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 4,024
NZ_UYYD01000025.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 2,589
NZ_UYYD01000026.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 1,868
NZ_UYYD01000027.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 1,868
NZ_UYYD01000028.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 1,851
NZ_UYYD01000029.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 1,806
NZ_UYYD01000030.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 1,658
NZ_UYYD01000031.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 1,616
NZ_UYYD01000032.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 1,432
NZ_UYYD01000033.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 1,033
NZ_UYYD01000034.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 866
NZ_UYYD01000035.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 831
NZ_UYYD01000036.1 Agathobaculum sp. Marseille-P7918, whole genome shotgun sequence 805

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory