fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_AS rectalis Marseille-P4200

Genome identifier: GCF_900626095.1

NCBI assembly name: PRJEB22819

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Clostridiaceae, Clostridium_AS, Clostridium_AS rectalis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium, Clostridium rectalis

Scaffolds: 30

Genes: 3,251 Protein-coding: 3,120 RNAs: 87 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_UYZZ01000001.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 588,380
NZ_UYZZ01000002.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 548,788
NZ_UYZZ01000003.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 394,865
NZ_UYZZ01000004.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 387,589
NZ_UYZZ01000005.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 243,679
NZ_UYZZ01000006.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 210,376
NZ_UYZZ01000007.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 170,542
NZ_UYZZ01000008.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 149,080
NZ_UYZZ01000009.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 146,102
NZ_UYZZ01000010.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 91,002
NZ_UYZZ01000011.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 77,181
NZ_UYZZ01000012.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 70,893
NZ_UYZZ01000013.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 56,038
NZ_UYZZ01000014.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 36,782
NZ_UYZZ01000015.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 36,007
NZ_UYZZ01000016.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 19,721
NZ_UYZZ01000017.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 14,868
NZ_UYZZ01000018.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 10,327
NZ_UYZZ01000019.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 6,806
NZ_UYZZ01000020.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 4,844
NZ_UYZZ01000021.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 2,960
NZ_UYZZ01000022.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 2,825
NZ_UYZZ01000023.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 1,617
NZ_UYZZ01000024.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 1,560
NZ_UYZZ01000025.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 1,511
NZ_UYZZ01000026.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 1,368
NZ_UYZZ01000027.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 992
NZ_UYZZ01000028.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 988
NZ_UYZZ01000029.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 890
NZ_UYZZ01000030.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence 845

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory