fast.genomicscompare 6,575 genera of bacteria & archaea

 

Anaerocaecibacter muris CLA-AA-M11

Genome identifier: GCF_943192945.1

NCBI assembly name: Eubacteriales_fam_nov_CLA_AA_M11

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Christensenellales, Pumilibacteraceae, Anaerocaecibacter, Anaerocaecibacter muris

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Pumilibacteraceae, Anaerocaecibacter, Anaerocaecibacter muris

Scaffolds: 12

Genes: 1,749 Protein-coding: 1,687 RNAs: 51 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CALPCE010000001.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_1_length_400106_cov_444.264081, whole genome shotgun sequence 400,106
NZ_CALPCE010000002.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_2_length_399085_cov_448.486211, whole genome shotgun sequence 399,085
NZ_CALPCE010000003.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_3_length_262420_cov_459.859973, whole genome shotgun sequence 262,420
NZ_CALPCE010000004.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_4_length_245957_cov_455.858618, whole genome shotgun sequence 245,957
NZ_CALPCE010000005.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_5_length_175385_cov_428.275281, whole genome shotgun sequence 175,385
NZ_CALPCE010000006.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_6_length_149507_cov_461.764699, whole genome shotgun sequence 149,507
NZ_CALPCE010000007.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_7_length_114401_cov_452.492285, whole genome shotgun sequence 114,401
NZ_CALPCE010000008.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_8_length_73368_cov_449.581640, whole genome shotgun sequence 73,368
NZ_CALPCE010000009.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_9_length_69915_cov_456.240528, whole genome shotgun sequence 69,915
NZ_CALPCE010000010.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_10_length_45038_cov_15.992994, whole genome shotgun sequence 45,038
NZ_CALPCE010000011.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_11_length_26654_cov_431.453512, whole genome shotgun sequence 26,654
NZ_CALPCE010000012.1 Anaerocaecibacter muris strain CLA-AA-M11 NODE_12_length_8618_cov_465.719822, whole genome shotgun sequence 8,618

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory