Genome identifier: GCF_943193195.1
NCBI assembly name: Mediterraneibacter_sp_nov_DSM111629
GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Schaedlerella, Schaedlerella agrestimuris
NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Mediterraneibacter, Mediterraneibacter agrestimuris
Scaffolds: 120
Genes: 3,866 Protein-coding: 3,674 RNAs: 65 pseudogenes: 127
GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)
| scaffoldId | description | length |
|---|---|---|
| NZ_CALPDG010000001.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_1_length_275957_cov_18.840202, whole genome shotgun sequence | 275,957 |
| NZ_CALPDG010000002.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_2_length_204368_cov_16.093426, whole genome shotgun sequence | 204,368 |
| NZ_CALPDG010000003.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_3_length_204321_cov_17.788645, whole genome shotgun sequence | 204,321 |
| NZ_CALPDG010000004.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_4_length_199748_cov_18.087819, whole genome shotgun sequence | 199,748 |
| NZ_CALPDG010000005.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_5_length_136384_cov_18.165362, whole genome shotgun sequence | 136,384 |
| NZ_CALPDG010000006.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_6_length_129830_cov_17.324177, whole genome shotgun sequence | 129,830 |
| NZ_CALPDG010000007.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_7_length_119185_cov_17.431298, whole genome shotgun sequence | 119,185 |
| NZ_CALPDG010000008.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_8_length_111589_cov_16.405131, whole genome shotgun sequence | 111,589 |
| NZ_CALPDG010000009.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_9_length_110977_cov_17.810523, whole genome shotgun sequence | 110,977 |
| NZ_CALPDG010000010.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_10_length_97662_cov_18.434831, whole genome shotgun sequence | 97,662 |
| NZ_CALPDG010000011.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_11_length_96084_cov_16.039341, whole genome shotgun sequence | 96,084 |
| NZ_CALPDG010000012.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_12_length_84057_cov_17.005930, whole genome shotgun sequence | 84,057 |
| NZ_CALPDG010000013.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_13_length_75825_cov_19.037414, whole genome shotgun sequence | 75,825 |
| NZ_CALPDG010000014.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_14_length_71584_cov_18.334107, whole genome shotgun sequence | 71,584 |
| NZ_CALPDG010000015.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_15_length_71469_cov_14.601160, whole genome shotgun sequence | 71,469 |
| NZ_CALPDG010000016.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_16_length_70204_cov_17.402570, whole genome shotgun sequence | 70,204 |
| NZ_CALPDG010000017.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_17_length_69821_cov_16.949458, whole genome shotgun sequence | 69,821 |
| NZ_CALPDG010000018.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_18_length_69490_cov_16.761442, whole genome shotgun sequence | 69,490 |
| NZ_CALPDG010000019.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_19_length_68106_cov_15.868865, whole genome shotgun sequence | 68,106 |
| NZ_CALPDG010000020.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_20_length_63018_cov_17.264184, whole genome shotgun sequence | 63,018 |
| NZ_CALPDG010000021.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_21_length_61641_cov_17.178351, whole genome shotgun sequence | 61,641 |
| NZ_CALPDG010000022.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_22_length_55613_cov_15.934997, whole genome shotgun sequence | 55,613 |
| NZ_CALPDG010000023.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_23_length_55526_cov_18.022976, whole genome shotgun sequence | 55,526 |
| NZ_CALPDG010000024.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_24_length_54512_cov_18.206081, whole genome shotgun sequence | 54,512 |
| NZ_CALPDG010000025.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_25_length_54192_cov_17.461111, whole genome shotgun sequence | 54,192 |
| NZ_CALPDG010000026.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_26_length_54178_cov_15.924197, whole genome shotgun sequence | 54,178 |
| NZ_CALPDG010000027.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_27_length_53131_cov_17.548328, whole genome shotgun sequence | 53,131 |
| NZ_CALPDG010000028.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_28_length_51833_cov_16.043782, whole genome shotgun sequence | 51,833 |
| NZ_CALPDG010000029.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_29_length_48248_cov_17.374105, whole genome shotgun sequence | 48,248 |
| NZ_CALPDG010000030.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_30_length_46152_cov_16.419794, whole genome shotgun sequence | 46,152 |
| NZ_CALPDG010000031.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_31_length_45241_cov_16.454920, whole genome shotgun sequence | 45,241 |
| NZ_CALPDG010000032.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_32_length_44908_cov_14.909527, whole genome shotgun sequence | 44,908 |
| NZ_CALPDG010000033.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_33_length_42374_cov_17.659834, whole genome shotgun sequence | 42,374 |
| NZ_CALPDG010000034.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_34_length_42153_cov_19.402177, whole genome shotgun sequence | 42,153 |
| NZ_CALPDG010000035.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_35_length_40068_cov_18.041009, whole genome shotgun sequence | 40,068 |
| NZ_CALPDG010000036.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_36_length_38938_cov_17.356965, whole genome shotgun sequence | 38,938 |
| NZ_CALPDG010000037.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_37_length_37087_cov_17.436963, whole genome shotgun sequence | 37,087 |
| NZ_CALPDG010000038.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_38_length_35814_cov_17.272687, whole genome shotgun sequence | 35,814 |
| NZ_CALPDG010000039.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_39_length_35592_cov_17.896410, whole genome shotgun sequence | 35,592 |
| NZ_CALPDG010000040.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_40_length_35525_cov_16.945216, whole genome shotgun sequence | 35,525 |
| NZ_CALPDG010000041.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_41_length_35245_cov_17.799591, whole genome shotgun sequence | 35,245 |
| NZ_CALPDG010000042.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_42_length_31109_cov_20.071700, whole genome shotgun sequence | 31,109 |
| NZ_CALPDG010000043.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_43_length_28569_cov_20.230345, whole genome shotgun sequence | 28,569 |
| NZ_CALPDG010000044.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_44_length_28459_cov_17.532767, whole genome shotgun sequence | 28,459 |
| NZ_CALPDG010000045.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_45_length_27352_cov_16.372429, whole genome shotgun sequence | 27,352 |
| NZ_CALPDG010000046.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_46_length_25633_cov_18.611950, whole genome shotgun sequence | 25,633 |
| NZ_CALPDG010000047.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_47_length_21141_cov_17.027488, whole genome shotgun sequence | 21,141 |
| NZ_CALPDG010000048.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_48_length_21105_cov_15.772066, whole genome shotgun sequence | 21,105 |
| NZ_CALPDG010000049.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_49_length_21003_cov_19.341129, whole genome shotgun sequence | 21,003 |
| NZ_CALPDG010000050.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_50_length_20574_cov_15.031127, whole genome shotgun sequence | 20,574 |
| NZ_CALPDG010000051.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_51_length_19045_cov_18.694064, whole genome shotgun sequence | 19,045 |
| NZ_CALPDG010000052.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_52_length_18497_cov_20.272910, whole genome shotgun sequence | 18,497 |
| NZ_CALPDG010000053.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_53_length_18326_cov_17.690010, whole genome shotgun sequence | 18,326 |
| NZ_CALPDG010000054.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_54_length_18094_cov_15.835766, whole genome shotgun sequence | 18,094 |
| NZ_CALPDG010000055.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_55_length_17866_cov_16.011749, whole genome shotgun sequence | 17,866 |
| NZ_CALPDG010000056.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_56_length_17531_cov_18.304572, whole genome shotgun sequence | 17,531 |
| NZ_CALPDG010000057.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_57_length_17102_cov_19.198473, whole genome shotgun sequence | 17,102 |
| NZ_CALPDG010000058.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_58_length_17053_cov_18.641023, whole genome shotgun sequence | 17,053 |
| NZ_CALPDG010000059.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_59_length_16710_cov_14.315878, whole genome shotgun sequence | 16,710 |
| NZ_CALPDG010000060.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_60_length_16438_cov_17.384634, whole genome shotgun sequence | 16,438 |
| NZ_CALPDG010000061.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_61_length_14536_cov_15.487931, whole genome shotgun sequence | 14,536 |
| NZ_CALPDG010000062.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_62_length_13853_cov_18.025697, whole genome shotgun sequence | 13,853 |
| NZ_CALPDG010000063.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_63_length_13650_cov_19.339866, whole genome shotgun sequence | 13,650 |
| NZ_CALPDG010000064.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_64_length_13565_cov_17.778692, whole genome shotgun sequence | 13,565 |
| NZ_CALPDG010000065.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_65_length_13350_cov_18.593762, whole genome shotgun sequence | 13,350 |
| NZ_CALPDG010000066.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_66_length_12875_cov_16.979684, whole genome shotgun sequence | 12,875 |
| NZ_CALPDG010000067.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_67_length_12863_cov_17.873142, whole genome shotgun sequence | 12,863 |
| NZ_CALPDG010000068.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_68_length_12770_cov_18.510045, whole genome shotgun sequence | 12,770 |
| NZ_CALPDG010000069.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_69_length_12099_cov_21.312843, whole genome shotgun sequence | 12,099 |
| NZ_CALPDG010000070.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_70_length_11981_cov_18.066448, whole genome shotgun sequence | 11,981 |
| NZ_CALPDG010000071.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_71_length_10487_cov_19.332853, whole genome shotgun sequence | 10,487 |
| NZ_CALPDG010000072.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_72_length_10238_cov_18.135617, whole genome shotgun sequence | 10,238 |
| NZ_CALPDG010000073.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_73_length_10219_cov_20.311970, whole genome shotgun sequence | 10,219 |
| NZ_CALPDG010000074.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_74_length_9982_cov_20.801372, whole genome shotgun sequence | 9,982 |
| NZ_CALPDG010000075.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_75_length_9964_cov_17.985334, whole genome shotgun sequence | 9,964 |
| NZ_CALPDG010000076.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_76_length_9796_cov_18.123572, whole genome shotgun sequence | 9,796 |
| NZ_CALPDG010000077.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_77_length_9447_cov_17.113340, whole genome shotgun sequence | 9,447 |
| NZ_CALPDG010000078.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_78_length_8204_cov_17.968992, whole genome shotgun sequence | 8,204 |
| NZ_CALPDG010000079.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_79_length_8186_cov_18.571710, whole genome shotgun sequence | 8,186 |
| NZ_CALPDG010000080.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_80_length_7394_cov_19.184775, whole genome shotgun sequence | 7,394 |
| NZ_CALPDG010000081.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_81_length_6836_cov_19.060512, whole genome shotgun sequence | 6,836 |
| NZ_CALPDG010000082.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_82_length_6621_cov_17.516045, whole genome shotgun sequence | 6,621 |
| NZ_CALPDG010000083.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_83_length_6278_cov_15.621029, whole genome shotgun sequence | 6,278 |
| NZ_CALPDG010000084.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_84_length_5772_cov_15.673398, whole genome shotgun sequence | 5,772 |
| NZ_CALPDG010000085.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_85_length_5272_cov_17.064485, whole genome shotgun sequence | 5,272 |
| NZ_CALPDG010000086.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_86_length_4959_cov_19.757886, whole genome shotgun sequence | 4,959 |
| NZ_CALPDG010000087.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_87_length_4889_cov_18.504156, whole genome shotgun sequence | 4,889 |
| NZ_CALPDG010000088.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_88_length_4744_cov_21.924363, whole genome shotgun sequence | 4,744 |
| NZ_CALPDG010000089.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_89_length_4194_cov_19.758319, whole genome shotgun sequence | 4,194 |
| NZ_CALPDG010000090.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_90_length_4132_cov_23.054747, whole genome shotgun sequence | 4,132 |
| NZ_CALPDG010000091.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_91_length_4081_cov_23.126873, whole genome shotgun sequence | 4,081 |
| NZ_CALPDG010000092.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_92_length_4005_cov_20.509929, whole genome shotgun sequence | 4,005 |
| NZ_CALPDG010000093.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_93_length_3697_cov_20.121271, whole genome shotgun sequence | 3,697 |
| NZ_CALPDG010000094.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_94_length_3566_cov_18.227859, whole genome shotgun sequence | 3,566 |
| NZ_CALPDG010000095.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_95_length_3436_cov_73.724620, whole genome shotgun sequence | 3,436 |
| NZ_CALPDG010000096.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_96_length_3374_cov_18.908705, whole genome shotgun sequence | 3,374 |
| NZ_CALPDG010000097.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_97_length_2884_cov_31.900962, whole genome shotgun sequence | 2,884 |
| NZ_CALPDG010000098.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_98_length_2823_cov_17.604880, whole genome shotgun sequence | 2,823 |
| NZ_CALPDG010000099.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_99_length_2823_cov_17.359432, whole genome shotgun sequence | 2,823 |
| NZ_CALPDG010000100.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_100_length_2558_cov_17.907295, whole genome shotgun sequence | 2,558 |
| NZ_CALPDG010000101.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_101_length_2456_cov_17.783522, whole genome shotgun sequence | 2,456 |
| NZ_CALPDG010000102.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_102_length_2292_cov_21.078104, whole genome shotgun sequence | 2,292 |
| NZ_CALPDG010000103.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_103_length_2074_cov_22.385578, whole genome shotgun sequence | 2,074 |
| NZ_CALPDG010000104.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_104_length_2064_cov_18.829391, whole genome shotgun sequence | 2,064 |
| NZ_CALPDG010000105.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_105_length_1998_cov_19.990109, whole genome shotgun sequence | 1,998 |
| NZ_CALPDG010000106.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_106_length_1959_cov_17.156748, whole genome shotgun sequence | 1,959 |
| NZ_CALPDG010000107.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_107_length_1735_cov_32.117008, whole genome shotgun sequence | 1,735 |
| NZ_CALPDG010000108.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_108_length_1681_cov_33.085411, whole genome shotgun sequence | 1,681 |
| NZ_CALPDG010000109.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_109_length_1667_cov_20.847799, whole genome shotgun sequence | 1,667 |
| NZ_CALPDG010000110.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_110_length_1493_cov_20.990446, whole genome shotgun sequence | 1,493 |
| NZ_CALPDG010000111.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_111_length_1475_cov_60.844778, whole genome shotgun sequence | 1,475 |
| NZ_CALPDG010000112.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_112_length_1292_cov_53.039506, whole genome shotgun sequence | 1,292 |
| NZ_CALPDG010000113.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_113_length_1216_cov_16.949956, whole genome shotgun sequence | 1,216 |
| NZ_CALPDG010000114.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_114_length_1199_cov_20.372549, whole genome shotgun sequence | 1,199 |
| NZ_CALPDG010000115.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_115_length_1119_cov_54.566219, whole genome shotgun sequence | 1,119 |
| NZ_CALPDG010000116.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_116_length_1117_cov_54.972115, whole genome shotgun sequence | 1,117 |
| NZ_CALPDG010000117.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_117_length_1105_cov_22.674125, whole genome shotgun sequence | 1,105 |
| NZ_CALPDG010000118.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_118_length_1098_cov_49.915769, whole genome shotgun sequence | 1,098 |
| NZ_CALPDG010000119.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_119_length_1071_cov_31.624748, whole genome shotgun sequence | 1,071 |
| NZ_CALPDG010000120.1 | Mediterraneibacter agrestimuris strain DSM 111629 NODE_120_length_1029_cov_15.501050, whole genome shotgun sequence | 1,029 |